Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.9□□□□□ -0.5
PrkcbP68404 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
PrkcbP68404 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
PrkcbP68404 Gm7593-201ENSMUST00000187246 644 ntBASIC11.9□□□□□ -0.5
PrkcbP68404 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.9□□□□□ -0.5
PrkcbP68404 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.9□□□□□ -0.5
PrkcbP68404 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
PrkcbP68404 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.9□□□□□ -0.5
PrkcbP68404 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.9□□□□□ -0.5
PrkcbP68404 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.9□□□□□ -0.5
PrkcbP68404 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
PrkcbP68404 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
PrkcbP68404 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.9□□□□□ -0.5
PrkcbP68404 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PrkcbP68404 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
PrkcbP68404 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
PrkcbP68404 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
PrkcbP68404 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
PrkcbP68404 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.89□□□□□ -0.51
PrkcbP68404 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
PrkcbP68404 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
PrkcbP68404 Gm26119-201ENSMUST00000175601 104 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Gm31274-201ENSMUST00000197356 229 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Gm33080-201ENSMUST00000205429 172 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.89□□□□□ -0.51
PrkcbP68404 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.89□□□□□ -0.51
PrkcbP68404 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.89□□□□□ -0.51
PrkcbP68404 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PrkcbP68404 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
PrkcbP68404 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.88□□□□□ -0.51
PrkcbP68404 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.88□□□□□ -0.51
PrkcbP68404 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
PrkcbP68404 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.88□□□□□ -0.51
PrkcbP68404 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
PrkcbP68404 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
PrkcbP68404 Gm20781-201ENSMUST00000193154 693 ntBASIC11.88□□□□□ -0.51
PrkcbP68404 Gm21736-201ENSMUST00000195399 693 ntBASIC11.88□□□□□ -0.51
PrkcbP68404 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.88□□□□□ -0.51
PrkcbP68404 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.88□□□□□ -0.51
PrkcbP68404 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms