Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tpm1P58771 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tpm1P58771 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm23949-201ENSMUST00000104027 127 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.24□□□□□ -0.45
Tpm1P58771 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm14724-201ENSMUST00000118400 537 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Gm13996-201ENSMUST00000118456 430 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm8459-201ENSMUST00000162504 760 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tpm1P58771 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tpm1P58771 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm2965-201ENSMUST00000198365 343 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Gm6867-201ENSMUST00000219165 425 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.24□□□□□ -0.45
Tpm1P58771 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tpm1P58771 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.24□□□□□ -0.45
Tpm1P58771 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tpm1P58771 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Tpm1P58771 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm15711-201ENSMUST00000118889 535 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.23□□□□□ -0.45
Tpm1P58771 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 Gm38341-201ENSMUST00000195357 515 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm5996-201ENSMUST00000211110 718 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm10288-201ENSMUST00000084614 537 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.23□□□□□ -0.45
Tpm1P58771 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tpm1P58771 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tpm1P58771 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.22□□□□□ -0.45
Tpm1P58771 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm24255-201ENSMUST00000104481 128 ntBASIC12.22□□□□□ -0.45
Tpm1P58771 Gm13916-201ENSMUST00000117368 628 ntBASIC12.22□□□□□ -0.45
Tpm1P58771 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.22□□□□□ -0.45
Tpm1P58771 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tpm1P58771 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.22□□□□□ -0.45
Tpm1P58771 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tpm1P58771 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms