Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 B9d1os-201ENSMUST00000137010 674 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 Mir6979-201ENSMUST00000183927 56 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 AC137950.2-201ENSMUST00000227127 1089 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.4□□□□□ -0.43
Rrp1P56183 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rrp1P56183 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Rrp1P56183 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Gm12566-201ENSMUST00000121479 359 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Rrp1P56183 Mir5120-201ENSMUST00000175020 78 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.39□□□□□ -0.43
Rrp1P56183 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Platr10-202ENSMUST00000191479 818 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Gm37835-201ENSMUST00000193305 361 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.39□□□□□ -0.43
Rrp1P56183 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Gm6905-201ENSMUST00000205729 511 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rrp1P56183 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rrp1P56183 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.39□□□□□ -0.43
Rrp1P56183 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.39□□□□□ -0.43
Rrp1P56183 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp1P56183 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rrp1P56183 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rrp1P56183 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm15264-201ENSMUST00000118050 502 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp1P56183 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp1P56183 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm25732-201ENSMUST00000175168 60 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Rrp1P56183 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm37981-201ENSMUST00000194280 535 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Gm5865-201ENSMUST00000198713 637 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp1P56183 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms