Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
NrlP54846 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.75□□□□□ -0.53
NrlP54846 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.75□□□□□ -0.53
NrlP54846 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.75□□□□□ -0.53
NrlP54846 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.75□□□□□ -0.53
NrlP54846 Gm9625-201ENSMUST00000180422 955 ntBASIC11.75□□□□□ -0.53
NrlP54846 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.75□□□□□ -0.53
NrlP54846 Gm20781-201ENSMUST00000193154 693 ntBASIC11.75□□□□□ -0.53
NrlP54846 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.75□□□□□ -0.53
NrlP54846 Gm37782-201ENSMUST00000194879 678 ntBASIC11.75□□□□□ -0.53
NrlP54846 Gm21736-201ENSMUST00000195399 693 ntBASIC11.75□□□□□ -0.53
NrlP54846 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.75□□□□□ -0.53
NrlP54846 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.75□□□□□ -0.53
NrlP54846 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.75□□□□□ -0.53
NrlP54846 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
NrlP54846 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.75□□□□□ -0.53
NrlP54846 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.75□□□□□ -0.53
NrlP54846 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
NrlP54846 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.75□□□□□ -0.53
NrlP54846 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
NrlP54846 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.75□□□□□ -0.53
NrlP54846 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
NrlP54846 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
NrlP54846 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
NrlP54846 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Gm12986-201ENSMUST00000119037 967 ntBASIC11.74□□□□□ -0.53
NrlP54846 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.74□□□□□ -0.53
NrlP54846 Gm25569-201ENSMUST00000157175 131 ntBASIC11.74□□□□□ -0.53
NrlP54846 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
NrlP54846 Gm27956-201ENSMUST00000175604 260 ntBASIC11.74□□□□□ -0.53
NrlP54846 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.74□□□□□ -0.53
NrlP54846 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.74□□□□□ -0.53
NrlP54846 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.74□□□□□ -0.53
NrlP54846 Gm19927-201ENSMUST00000185792 781 ntBASIC11.74□□□□□ -0.53
NrlP54846 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.74□□□□□ -0.53
NrlP54846 Gm42751-201ENSMUST00000198065 559 ntBASIC11.74□□□□□ -0.53
NrlP54846 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
NrlP54846 Gm2448-201ENSMUST00000207080 559 ntBASIC11.74□□□□□ -0.53
NrlP54846 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.74□□□□□ -0.53
NrlP54846 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.74□□□□□ -0.53
NrlP54846 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
NrlP54846 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
NrlP54846 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms