Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.63□□□□□ -0.87
TgfaP48030 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
TgfaP48030 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TgfaP48030 Gm16209-201ENSMUST00000118457 627 ntBASIC9.63□□□□□ -0.87
TgfaP48030 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Gm10171-201ENSMUST00000126220 628 ntBASIC9.63□□□□□ -0.87
TgfaP48030 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.63□□□□□ -0.87
TgfaP48030 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC9.63□□□□□ -0.87
TgfaP48030 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.63□□□□□ -0.87
TgfaP48030 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Gm44605-201ENSMUST00000206892 949 ntBASIC9.63□□□□□ -0.87
TgfaP48030 AC241616.1-201ENSMUST00000213741 166 ntBASIC9.63□□□□□ -0.87
TgfaP48030 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC9.63□□□□□ -0.87
TgfaP48030 AC164087.2-201ENSMUST00000216206 1072 ntBASIC9.63□□□□□ -0.87
TgfaP48030 AC134537.1-201ENSMUST00000219205 265 ntBASIC9.63□□□□□ -0.87
TgfaP48030 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 AC154213.1-201ENSMUST00000228234 583 ntBASIC9.63□□□□□ -0.87
TgfaP48030 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
TgfaP48030 Gm10233-201ENSMUST00000089275 628 ntBASIC9.63□□□□□ -0.87
TgfaP48030 n-R5s71-201ENSMUST00000093668 119 ntBASIC9.63□□□□□ -0.87
TgfaP48030 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TgfaP48030 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TgfaP48030 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.63□□□□□ -0.87
TgfaP48030 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC9.63□□□□□ -0.87
TgfaP48030 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
TgfaP48030 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
TgfaP48030 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
TgfaP48030 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
TgfaP48030 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
TgfaP48030 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
TgfaP48030 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Gm16305-201ENSMUST00000140747 556 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Gm7805-201ENSMUST00000154348 448 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 Gm18014-201ENSMUST00000183369 817 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Mir6359-201ENSMUST00000183668 81 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Gm5254-201ENSMUST00000188353 977 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Gm29808-201ENSMUST00000194419 468 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC9.62□□□□□ -0.87
TgfaP48030 Gm44498-201ENSMUST00000199509 111 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Gm43811-201ENSMUST00000202862 695 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC9.62□□□□□ -0.87
TgfaP48030 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.62□□□□□ -0.87
TgfaP48030 CT030195.2-201ENSMUST00000226074 1286 ntBASIC9.62□□□□□ -0.87
TgfaP48030 AC101205.2-201ENSMUST00000226206 715 ntBASIC9.62□□□□□ -0.87
TgfaP48030 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
TgfaP48030 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
TgfaP48030 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
TgfaP48030 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms