Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Nkx2-6P43688 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm14213-201ENSMUST00000119778 768 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm12712-201ENSMUST00000120676 801 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm24328-201ENSMUST00000175104 67 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm9507-202ENSMUST00000180157 654 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm19927-201ENSMUST00000185792 781 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gm43778-201ENSMUST00000199438 199 ntBASIC10.45□□□□□ -0.74
Nkx2-6P43688 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nkx2-6P43688 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm22937-201ENSMUST00000103954 131 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm13039-201ENSMUST00000118638 794 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm11354-201ENSMUST00000121974 422 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm15620-201ENSMUST00000122949 270 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Mir6923-201ENSMUST00000184592 72 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Mir7035-201ENSMUST00000184713 82 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Gm18706-201ENSMUST00000210053 1066 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 AC142266.1-201ENSMUST00000228107 415 ntBASIC10.44□□□□□ -0.74
Nkx2-6P43688 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nkx2-6P43688 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms