Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC17.23■□□□□ 0.35
PtprkP35822 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Gm14153-201ENSMUST00000119923 1139 ntBASIC17.23■□□□□ 0.35
PtprkP35822 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PtprkP35822 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC17.23■□□□□ 0.35
PtprkP35822 Gm15664-201ENSMUST00000160167 184 ntBASIC17.23■□□□□ 0.35
PtprkP35822 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Gm27149-201ENSMUST00000184716 1266 ntBASIC17.23■□□□□ 0.35
PtprkP35822 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PtprkP35822 Gm45308-201ENSMUST00000210610 415 ntBASIC17.23■□□□□ 0.35
PtprkP35822 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC17.23■□□□□ 0.35
PtprkP35822 AC165092.1-201ENSMUST00000224018 486 ntBASIC17.23■□□□□ 0.35
PtprkP35822 Gm9790-201ENSMUST00000054148 288 ntBASIC17.23■□□□□ 0.35
PtprkP35822 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PtprkP35822 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC17.22■□□□□ 0.35
PtprkP35822 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
PtprkP35822 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC17.22■□□□□ 0.35
PtprkP35822 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC17.22■□□□□ 0.35
PtprkP35822 Gm29157-201ENSMUST00000188753 612 ntBASIC17.22■□□□□ 0.35
PtprkP35822 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Gm19817-201ENSMUST00000199764 2132 ntBASIC17.22■□□□□ 0.35
PtprkP35822 Gm9273-201ENSMUST00000200606 715 ntBASIC17.22■□□□□ 0.35
PtprkP35822 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Gm18504-201ENSMUST00000220917 929 ntBASIC17.22■□□□□ 0.35
PtprkP35822 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
PtprkP35822 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 A1cf-204ENSMUST00000224564 1432 ntBASIC17.22■□□□□ 0.35
PtprkP35822 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC17.22■□□□□ 0.35
PtprkP35822 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PtprkP35822 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Cog3-203ENSMUST00000227473 4197 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 AC116596.1-201ENSMUST00000228112 1762 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Gm13758-201ENSMUST00000118699 743 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC17.21■□□□□ 0.35
PtprkP35822 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC17.21■□□□□ 0.35
PtprkP35822 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm21963-201ENSMUST00000179519 330 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm20474-201ENSMUST00000180089 596 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm9578-201ENSMUST00000182354 753 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PtprkP35822 Gm28179-201ENSMUST00000188365 613 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 Gm18299-201ENSMUST00000192026 636 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm2328-201ENSMUST00000193525 535 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC17.21■□□□□ 0.35
PtprkP35822 Gm45363-201ENSMUST00000210196 1294 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Gm2716-201ENSMUST00000212350 643 ntBASIC17.21■□□□□ 0.35
PtprkP35822 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Elobl-202ENSMUST00000082339 300 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC17.21■□□□□ 0.35
PtprkP35822 Gm10617-201ENSMUST00000098368 1172 ntBASIC17.21■□□□□ 0.35
PtprkP35822 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PtprkP35822 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PtprkP35822 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms