Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nfkb1P25799 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.37□□□□□ -0.59
Nfkb1P25799 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Nfkb1P25799 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nfkb1P25799 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gm15003-201ENSMUST00000118884 446 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gm18201-201ENSMUST00000174735 875 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Gm19927-201ENSMUST00000185792 781 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nfkb1P25799 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nfkb1P25799 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.36□□□□□ -0.59
Nfkb1P25799 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gm14993-201ENSMUST00000121180 164 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gm5529-201ENSMUST00000165691 891 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gm42430-201ENSMUST00000197209 616 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.35□□□□□ -0.59
Nfkb1P25799 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nfkb1P25799 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nfkb1P25799 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms