Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.09□□□□□ -0.63
VimP20152 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.09□□□□□ -0.63
VimP20152 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.09□□□□□ -0.63
VimP20152 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.09□□□□□ -0.63
VimP20152 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
VimP20152 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
VimP20152 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.09□□□□□ -0.63
VimP20152 Olfml3-204ENSMUST00000169286 874 ntBASIC11.09□□□□□ -0.63
VimP20152 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.09□□□□□ -0.63
VimP20152 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.09□□□□□ -0.63
VimP20152 Gm8712-201ENSMUST00000221090 701 ntBASIC11.09□□□□□ -0.63
VimP20152 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.09□□□□□ -0.63
VimP20152 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.09□□□□□ -0.63
VimP20152 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
VimP20152 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.09□□□□□ -0.63
VimP20152 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
VimP20152 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Gm44062-201ENSMUST00000203312 4857 ntBASIC11.09□□□□□ -0.63
VimP20152 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
VimP20152 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.09□□□□□ -0.63
VimP20152 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
VimP20152 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
VimP20152 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
VimP20152 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
VimP20152 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
VimP20152 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC11.08□□□□□ -0.64
VimP20152 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.08□□□□□ -0.64
VimP20152 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.08□□□□□ -0.64
VimP20152 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.08□□□□□ -0.64
VimP20152 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Gm42867-201ENSMUST00000202995 469 ntBASIC11.08□□□□□ -0.64
VimP20152 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Gm6013-201ENSMUST00000212264 699 ntBASIC11.08□□□□□ -0.64
VimP20152 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.08□□□□□ -0.64
VimP20152 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
VimP20152 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Gm45867-201ENSMUST00000208201 2317 ntBASIC11.08□□□□□ -0.64
VimP20152 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
VimP20152 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
VimP20152 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
VimP20152 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
VimP20152 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC11.07□□□□□ -0.64
VimP20152 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
VimP20152 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC11.07□□□□□ -0.64
VimP20152 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.07□□□□□ -0.64
VimP20152 Gm7103-201ENSMUST00000195642 1852 ntBASIC11.07□□□□□ -0.64
VimP20152 Snord17-201ENSMUST00000104526 238 ntBASIC11.07□□□□□ -0.64
VimP20152 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
VimP20152 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.07□□□□□ -0.64
VimP20152 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.07□□□□□ -0.64
VimP20152 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
VimP20152 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
VimP20152 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.07□□□□□ -0.64
VimP20152 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.07□□□□□ -0.64
VimP20152 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.07□□□□□ -0.64
VimP20152 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
VimP20152 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.07□□□□□ -0.64
VimP20152 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms