Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
P04224 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.65□□□□□ -0.86
P04224 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
P04224 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
P04224 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
P04224 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.65□□□□□ -0.86
P04224 Gm11500-201ENSMUST00000118237 601 ntBASIC9.65□□□□□ -0.86
P04224 Gm27501-201ENSMUST00000183599 107 ntBASIC9.65□□□□□ -0.86
P04224 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.65□□□□□ -0.86
P04224 Gm6334-201ENSMUST00000207083 228 ntBASIC9.65□□□□□ -0.86
P04224 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.65□□□□□ -0.86
P04224 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.65□□□□□ -0.86
P04224 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
P04224 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.65□□□□□ -0.86
P04224 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
P04224 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.65□□□□□ -0.86
P04224 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
P04224 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
P04224 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
P04224 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
P04224 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.64□□□□□ -0.87
P04224 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.64□□□□□ -0.87
P04224 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.64□□□□□ -0.87
P04224 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC9.64□□□□□ -0.87
P04224 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
P04224 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Gm26286-201ENSMUST00000104166 134 ntBASIC9.64□□□□□ -0.87
P04224 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
P04224 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
P04224 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 AY702102-202ENSMUST00000194651 1173 ntBASIC9.64□□□□□ -0.87
P04224 Gm6450-201ENSMUST00000200896 574 ntBASIC9.64□□□□□ -0.87
P04224 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.64□□□□□ -0.87
P04224 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.64□□□□□ -0.87
P04224 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
P04224 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
P04224 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
P04224 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.64□□□□□ -0.87
P04224 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.64□□□□□ -0.87
P04224 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.64□□□□□ -0.87
P04224 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
P04224 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
P04224 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P04224 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
P04224 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms