Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.32□□□□□ -0.6
CopeO89079 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.32□□□□□ -0.6
CopeO89079 Gm15198-201ENSMUST00000117283 177 ntBASIC11.32□□□□□ -0.6
CopeO89079 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.32□□□□□ -0.6
CopeO89079 Gm9089-201ENSMUST00000122027 526 ntBASIC11.32□□□□□ -0.6
CopeO89079 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.32□□□□□ -0.6
CopeO89079 Gm21778-201ENSMUST00000178779 471 ntBASIC11.32□□□□□ -0.6
CopeO89079 Gm29067-201ENSMUST00000190821 470 ntBASIC11.32□□□□□ -0.6
CopeO89079 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.32□□□□□ -0.6
CopeO89079 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.32□□□□□ -0.6
CopeO89079 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.32□□□□□ -0.6
CopeO89079 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.32□□□□□ -0.6
CopeO89079 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.32□□□□□ -0.6
CopeO89079 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.32□□□□□ -0.6
CopeO89079 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.31□□□□□ -0.6
CopeO89079 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.31□□□□□ -0.6
CopeO89079 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.31□□□□□ -0.6
CopeO89079 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gm8302-201ENSMUST00000119217 852 ntBASIC11.31□□□□□ -0.6
CopeO89079 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.31□□□□□ -0.6
CopeO89079 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.31□□□□□ -0.6
CopeO89079 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.31□□□□□ -0.6
CopeO89079 Gm7584-201ENSMUST00000175829 940 ntBASIC11.31□□□□□ -0.6
CopeO89079 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CopeO89079 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.31□□□□□ -0.6
CopeO89079 Gm43630-201ENSMUST00000201550 776 ntBASIC11.31□□□□□ -0.6
CopeO89079 Gm8574-201ENSMUST00000203207 924 ntBASIC11.31□□□□□ -0.6
CopeO89079 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.31□□□□□ -0.6
CopeO89079 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.31□□□□□ -0.6
CopeO89079 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
CopeO89079 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CopeO89079 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CopeO89079 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
CopeO89079 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CopeO89079 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.3□□□□□ -0.6
CopeO89079 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CopeO89079 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CopeO89079 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CopeO89079 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CopeO89079 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CopeO89079 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms