Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm21907-201ENSMUST00000192989 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm20928-201ENSMUST00000192992 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm20851-201ENSMUST00000193038 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm37476-201ENSMUST00000193046 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm21678-201ENSMUST00000193567 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm21768-201ENSMUST00000194103 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm20836-201ENSMUST00000194582 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm21660-201ENSMUST00000195789 696 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm44388-201ENSMUST00000204350 258 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm35412-201ENSMUST00000220437 999 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gm6129-201ENSMUST00000220725 801 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 AC163038.2-201ENSMUST00000224851 650 ntBASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc188F6WEU2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm5400-201ENSMUST00000118494 943 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm8809-201ENSMUST00000119367 743 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm12420-201ENSMUST00000119869 1048 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm25145-201ENSMUST00000177640 110 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 AC160138.2-201ENSMUST00000220255 1531 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ccdc188F6WEU2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 AC147366.2-201ENSMUST00000226859 2038 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm44167-201ENSMUST00000204957 1878 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms