Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Gm12887B1AVM1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC8.84□□□□□ -1
Gm12887B1AVM1 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Gm12887B1AVM1 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC8.84□□□□□ -1
Gm12887B1AVM1 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm8862-201ENSMUST00000198379 1346 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm14592-201ENSMUST00000117201 560 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm13296-201ENSMUST00000117854 997 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm11663-201ENSMUST00000117888 290 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC8.83□□□□□ -1
Gm12887B1AVM1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm27627-201ENSMUST00000183644 150 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm45224-201ENSMUST00000208203 414 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm5996-201ENSMUST00000211110 718 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 CT025645.2-201ENSMUST00000223278 3827 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 CT025533.2-201ENSMUST00000228715 1248 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm37264-201ENSMUST00000194916 2192 ntBASIC8.83□□□□□ -1
Gm12887B1AVM1 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC8.83□□□□□ -1
Gm12887B1AVM1 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Gm12887B1AVM1 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Gm12887B1AVM1 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm5525-201ENSMUST00000190438 1312 ntBASIC8.82□□□□□ -1
Gm12887B1AVM1 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm25148-201ENSMUST00000104611 123 ntBASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm12570-201ENSMUST00000122047 1030 ntBASIC8.82□□□□□ -1
Gm12887B1AVM1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC8.82□□□□□ -1
Gm12887B1AVM1 Snora78-201ENSMUST00000158630 128 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms