Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm11451-201ENSMUST00000118946 630 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm12516-201ENSMUST00000120819 385 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm14460-201ENSMUST00000121511 639 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Mir1896-201ENSMUST00000122641 81 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm24398-201ENSMUST00000157870 109 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm22138-201ENSMUST00000158748 128 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm7985-201ENSMUST00000183329 981 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm37597-201ENSMUST00000191853 382 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm25580-201ENSMUST00000083409 327 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rnf6Q9DBU5 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm26013-201ENSMUST00000104404 119 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm11952-201ENSMUST00000121172 821 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm9369-201ENSMUST00000196009 733 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm44329-201ENSMUST00000197469 112 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm43380-201ENSMUST00000200421 220 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rnf6Q9DBU5 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms