Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm13117-201ENSMUST00000120894 691 ntBASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.51□□□□□ -0.57
Chmp2aQ9DB34 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Mir6407-201ENSMUST00000184510 101 ntBASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms