Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm26956-201ENSMUST00000182176 986 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm43962-201ENSMUST00000203898 190 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm44798-201ENSMUST00000208123 2410 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sf3a3Q9D554 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm15617-201ENSMUST00000118973 771 ntBASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm14660-201ENSMUST00000119809 575 ntBASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm45113-201ENSMUST00000207518 165 ntBASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gm30373-201ENSMUST00000215774 3500 ntTSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sf3a3Q9D554 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm23061-201ENSMUST00000102348 116 ntBASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm15370-201ENSMUST00000117158 253 ntBASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sf3a3Q9D554 Gm15547-201ENSMUST00000122152 333 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms