Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.74□□□□□ -0.85
Scrt1Q99M85 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Scrt1Q99M85 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Scrt1Q99M85 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm12906-201ENSMUST00000154610 441 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm25226-201ENSMUST00000158198 123 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm23694-201ENSMUST00000179335 110 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Mir8093-201ENSMUST00000185043 137 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm37197-201ENSMUST00000195607 401 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm2448-201ENSMUST00000207080 559 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 AC142266.1-201ENSMUST00000228107 415 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.73□□□□□ -0.85
Scrt1Q99M85 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Scrt1Q99M85 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms