Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm15528-201ENSMUST00000117821 864 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Mir7051-201ENSMUST00000184167 73 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.41□□□□□ -0.58
Trim60Q8VI40 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.41□□□□□ -0.58
Trim60Q8VI40 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trim60Q8VI40 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm23061-201ENSMUST00000102348 116 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm4917-201ENSMUST00000121452 650 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm24992-201ENSMUST00000157412 130 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm42859-201ENSMUST00000199572 193 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm5369-201ENSMUST00000217499 588 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.4□□□□□ -0.58
Trim60Q8VI40 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trim60Q8VI40 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim60Q8VI40 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim60Q8VI40 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trim60Q8VI40 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim60Q8VI40 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trim60Q8VI40 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trim60Q8VI40 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms