Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddx54Q8K4L0 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm22751-201ENSMUST00000102077 109 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Mir692-3-201ENSMUST00000102079 109 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Mir692-2-201ENSMUST00000102081 109 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm15132-201ENSMUST00000118581 652 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm17797-201ENSMUST00000182175 997 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm8170-201ENSMUST00000218581 945 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm8796-201ENSMUST00000219122 936 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm18042-201ENSMUST00000219887 790 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 AC134860.2-201ENSMUST00000225277 1036 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 AC163646.3-201ENSMUST00000228879 772 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddx54Q8K4L0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gm18443-201ENSMUST00000185358 556 ntBASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gm3945-201ENSMUST00000196637 683 ntBASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gm2716-201ENSMUST00000212350 643 ntBASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gm5507-201ENSMUST00000091897 1008 ntBASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ddx54Q8K4L0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 AC153524.2-202ENSMUST00000220401 1794 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Gm23479-201ENSMUST00000158876 122 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Gm22662-201ENSMUST00000175290 256 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Lect2-202ENSMUST00000225183 823 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 AC154806.7-201ENSMUST00000227998 202 ntBASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ddx54Q8K4L0 Gm10617-201ENSMUST00000098368 1172 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms