Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm23045-201ENSMUST00000175041 96 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm21092-201ENSMUST00000178995 955 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Mir8115-201ENSMUST00000184992 119 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm9555-201ENSMUST00000200908 583 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm44315-201ENSMUST00000203041 219 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm18164-201ENSMUST00000213769 927 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm18166-201ENSMUST00000215557 927 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm5468-202ENSMUST00000227851 682 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc38Q8CDN8 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm8737-201ENSMUST00000122208 642 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm45398-201ENSMUST00000210561 165 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm9111-201ENSMUST00000219394 709 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ccdc38Q8CDN8 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc38Q8CDN8 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 294.3 ms