Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.88□□□□□ -0.35
Vps53Q8CCB4 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.88□□□□□ -0.35
Vps53Q8CCB4 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps53Q8CCB4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm14807-201ENSMUST00000116640 983 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm13117-201ENSMUST00000120894 691 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm20392-201ENSMUST00000173047 701 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps53Q8CCB4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm12247-201ENSMUST00000117585 670 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm10169-201ENSMUST00000121822 348 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm4862-201ENSMUST00000170405 438 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm3726-201ENSMUST00000203110 785 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm18463-201ENSMUST00000207258 474 ntBASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.86□□□□□ -0.35
Vps53Q8CCB4 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms