Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm14892-201ENSMUST00000117636 267 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm12029-201ENSMUST00000120073 832 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm1848-201ENSMUST00000120711 789 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm40414-201ENSMUST00000197608 481 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim9Q8C7M3 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm11952-201ENSMUST00000121172 821 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm42657-201ENSMUST00000201746 211 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm45550-201ENSMUST00000209380 946 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim9Q8C7M3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim9Q8C7M3 Snord23-201ENSMUST00000116828 109 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms