Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm22903-201ENSMUST00000175193 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25070-201ENSMUST00000175237 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm24159-201ENSMUST00000175264 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25299-201ENSMUST00000175283 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23798-201ENSMUST00000175560 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23802-201ENSMUST00000175565 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25708-201ENSMUST00000177687 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm24370-201ENSMUST00000178007 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23049-201ENSMUST00000178068 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm28019-201ENSMUST00000178138 101 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25571-201ENSMUST00000178322 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25355-201ENSMUST00000178456 101 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm24975-201ENSMUST00000178492 101 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23189-201ENSMUST00000178954 102 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25100-201ENSMUST00000179750 101 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm23064-201ENSMUST00000179866 101 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm18801-201ENSMUST00000186616 536 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gm43778-201ENSMUST00000199438 199 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 AC162932.1-201ENSMUST00000219209 872 ntBASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sh3rf2Q8BZT2 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm15136-201ENSMUST00000120552 533 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm11993-201ENSMUST00000121861 820 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm13981-201ENSMUST00000122360 447 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Mir1893-201ENSMUST00000122565 83 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm20392-201ENSMUST00000173047 701 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm25677-201ENSMUST00000174983 72 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm43506-201ENSMUST00000200675 753 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.18□□□□□ -0.62
Sh3rf2Q8BZT2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sh3rf2Q8BZT2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms