Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm24844-201ENSMUST00000158679 127 ntBASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm2260-201ENSMUST00000184965 657 ntBASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm44506-201ENSMUST00000206278 965 ntBASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm17825-201ENSMUST00000206836 794 ntBASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gm5363-201ENSMUST00000211927 938 ntBASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Smarcd3Q6P9Z1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm4294-201ENSMUST00000105169 614 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm13035-201ENSMUST00000117496 342 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm13809-201ENSMUST00000117921 597 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Smarcd3Q6P9Z1 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm14058-201ENSMUST00000116082 735 ntBASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm7851-201ENSMUST00000117574 323 ntBASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm8111-201ENSMUST00000117659 987 ntBASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm15595-201ENSMUST00000120840 961 ntBASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.1□□□□□ -0.79
Smarcd3Q6P9Z1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms