Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm15197-201ENSMUST00000120526 478 ntBASIC12.33□□□□□ -0.44
Usp49Q6P9L4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Mir1896-201ENSMUST00000122641 81 ntBASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm27441-201ENSMUST00000185000 105 ntBASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Platr10-202ENSMUST00000191479 818 ntBASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm39288-201ENSMUST00000210554 446 ntBASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp49Q6P9L4 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm11573-201ENSMUST00000119956 394 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm28388-201ENSMUST00000186262 437 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm38321-201ENSMUST00000195053 235 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm9369-201ENSMUST00000196009 733 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp49Q6P9L4 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Gm12029-201ENSMUST00000120073 832 ntBASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp49Q6P9L4 Gm42657-201ENSMUST00000201746 211 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms