Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm1848-201ENSMUST00000120711 789 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm43947-201ENSMUST00000203019 959 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm8285-201ENSMUST00000208293 759 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm18042-201ENSMUST00000219887 790 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ctdnep1Q3TP92 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Mir7076-201ENSMUST00000183519 74 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm42997-202ENSMUST00000200321 985 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ctdnep1Q3TP92 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm12029-201ENSMUST00000120073 832 ntBASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm5244-201ENSMUST00000164001 339 ntBASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm19459-201ENSMUST00000176240 835 ntBASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.66□□□□□ -0.38
Ctdnep1Q3TP92 Gm32111-201ENSMUST00000207689 846 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms