Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim43aQ3TL54 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm9062-201ENSMUST00000117712 727 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm11450-201ENSMUST00000121144 333 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Mir6979-201ENSMUST00000183927 56 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Spata33-207ENSMUST00000212760 4074 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.69□□□□□ -0.54
Trim43aQ3TL54 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm24891-201ENSMUST00000104391 136 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 B9d1os-201ENSMUST00000137010 674 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm42859-201ENSMUST00000199572 193 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm4482-201ENSMUST00000200876 742 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Gm10288-201ENSMUST00000084614 537 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Trim43aQ3TL54 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms