Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm45206-201ENSMUST00000206885 2285 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm5703-201ENSMUST00000186658 3973 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm11836-201ENSMUST00000121022 441 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm24844-201ENSMUST00000158679 127 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm22138-201ENSMUST00000158748 128 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm7741-201ENSMUST00000181445 989 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm37981-201ENSMUST00000194280 535 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm5542-201ENSMUST00000195485 1089 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Igkv2-116-201ENSMUST00000199327 362 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC8.57□□□□□ -1.04
Cdx4Q07424 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm10254-201ENSMUST00000052888 867 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm6903-201ENSMUST00000160509 1366 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 CT010447.1-201ENSMUST00000225657 1608 ntBASIC8.57□□□□□ -1.04
Cdx4Q07424 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cdx4Q07424 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cdx4Q07424 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Gm14071-201ENSMUST00000117817 509 ntBASIC8.56□□□□□ -1.04
Cdx4Q07424 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC8.56□□□□□ -1.04
Cdx4Q07424 Gm22442-201ENSMUST00000157256 144 ntBASIC8.56□□□□□ -1.04
Cdx4Q07424 Gm22846-201ENSMUST00000157706 270 ntBASIC8.56□□□□□ -1.04
Cdx4Q07424 Gm8194-201ENSMUST00000159783 859 ntBASIC8.56□□□□□ -1.04
Cdx4Q07424 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Cdx4Q07424 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms