Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Gm26235-201ENSMUST00000175533 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm25084-201ENSMUST00000175556 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm24973-201ENSMUST00000175588 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm23292-201ENSMUST00000175618 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm23646-201ENSMUST00000178119 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm24643-201ENSMUST00000178305 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm24302-201ENSMUST00000178350 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm26386-201ENSMUST00000178407 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm25458-201ENSMUST00000178981 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm22825-201ENSMUST00000179444 101 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm7251-201ENSMUST00000182661 1009 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm34780-201ENSMUST00000193896 949 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 n-R5s5-201ENSMUST00000083134 119 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm4880-201ENSMUST00000207645 1696 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 AC130671.3-201ENSMUST00000227393 1897 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Gm15383-201ENSMUST00000121889 1443 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cacna1sQ02789 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.66□□□□□ -0.22
Cacna1sQ02789 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm14111-201ENSMUST00000119851 999 ntBASIC13.65□□□□□ -0.22
Cacna1sQ02789 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm8055-201ENSMUST00000099956 1008 ntBASIC13.65□□□□□ -0.22
Cacna1sQ02789 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Erich3-203ENSMUST00000189969 3460 ntBASIC13.65□□□□□ -0.22
Cacna1sQ02789 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm14276-201ENSMUST00000117941 720 ntBASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Ighv5-10-201ENSMUST00000194591 252 ntBASIC13.65□□□□□ -0.22
Cacna1sQ02789 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Gm38348-201ENSMUST00000191718 2273 ntBASIC13.65□□□□□ -0.22
Cacna1sQ02789 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cacna1sQ02789 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cacna1sQ02789 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cacna1sQ02789 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm22582-201ENSMUST00000102283 94 ntBASIC13.64□□□□□ -0.23
Cacna1sQ02789 Mir675-201ENSMUST00000102320 84 ntBASIC13.64□□□□□ -0.23
Cacna1sQ02789 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 H2-Pb-201ENSMUST00000172731 531 ntBASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm45780-201ENSMUST00000212089 224 ntBASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 AC129590.1-201ENSMUST00000225573 852 ntBASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm43625-201ENSMUST00000199177 1539 ntBASIC13.64□□□□□ -0.23
Cacna1sQ02789 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cacna1sQ02789 Gm46339-201ENSMUST00000222720 3539 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms