Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
GabpaQ00422 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GabpaQ00422 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GabpaQ00422 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
GabpaQ00422 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
GabpaQ00422 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GabpaQ00422 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Gm12943-201ENSMUST00000119616 210 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.52□□□□□ -0.41
GabpaQ00422 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.52□□□□□ -0.41
GabpaQ00422 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.52□□□□□ -0.41
GabpaQ00422 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.52□□□□□ -0.41
GabpaQ00422 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GabpaQ00422 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GabpaQ00422 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GabpaQ00422 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GabpaQ00422 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC12.52□□□□□ -0.41
GabpaQ00422 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GabpaQ00422 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Rubie-203ENSMUST00000227803 2430 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Gm14113-201ENSMUST00000121399 976 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Gm12745-201ENSMUST00000121767 214 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.51□□□□□ -0.41
GabpaQ00422 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Gm24312-201ENSMUST00000178677 119 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.51□□□□□ -0.41
GabpaQ00422 Gm27440-201ENSMUST00000184785 107 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Gm19640-201ENSMUST00000214849 464 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
GabpaQ00422 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.51□□□□□ -0.41
GabpaQ00422 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.51□□□□□ -0.41
GabpaQ00422 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC12.51□□□□□ -0.41
GabpaQ00422 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GabpaQ00422 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.51□□□□□ -0.41
GabpaQ00422 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.5□□□□□ -0.41
GabpaQ00422 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GabpaQ00422 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms