Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcc1P97496 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcc1P97496 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm11919-201ENSMUST00000117609 721 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm5510-201ENSMUST00000117826 486 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcc1P97496 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm8226-201ENSMUST00000190511 798 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm8643-201ENSMUST00000195228 625 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm43726-201ENSMUST00000199110 775 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm44420-201ENSMUST00000203669 490 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcc1P97496 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.85□□□□□ -0.19
Smarcc1P97496 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smarcc1P97496 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcc1P97496 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm16441-201ENSMUST00000138176 924 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm6038-201ENSMUST00000154310 948 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm29304-201ENSMUST00000186555 695 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm29223-201ENSMUST00000188867 695 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm37921-201ENSMUST00000194333 695 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm43002-201ENSMUST00000200310 155 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcc1P97496 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarcc1P97496 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.84□□□□□ -0.19
Smarcc1P97496 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarcc1P97496 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcc1P97496 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcc1P97496 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcc1P97496 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcc1P97496 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarcc1P97496 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.83□□□□□ -0.19
Smarcc1P97496 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarcc1P97496 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 256.1 ms