Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm27444-201ENSMUST00000184157 137 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.25□□□□□ -0.77
Cacna1aP97445 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Cacna1aP97445 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Cacna1aP97445 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Cacna2d3-208ENSMUST00000225985 918 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Matn2-203ENSMUST00000226766 3252 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm11191-201ENSMUST00000117231 610 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm9095-201ENSMUST00000117607 881 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm15625-201ENSMUST00000117617 1093 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm13426-201ENSMUST00000117887 795 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm9133-201ENSMUST00000118289 540 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm14227-201ENSMUST00000119431 629 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm6758-201ENSMUST00000119643 1055 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm9097-201ENSMUST00000120514 880 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm16165-201ENSMUST00000160140 795 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Mir6934-201ENSMUST00000183965 62 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm43106-201ENSMUST00000199485 637 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm6518-201ENSMUST00000208450 342 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 AC154433.1-201ENSMUST00000224401 1183 ntBASIC10.24□□□□□ -0.77
Cacna1aP97445 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cacna1aP97445 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.24□□□□□ -0.77
Cacna1aP97445 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cacna1aP97445 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms