Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
SgcaP82350 Cxcl12-201ENSMUST00000073043 5627 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SgcaP82350 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
SgcaP82350 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
SgcaP82350 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Ctnnd1-205ENSMUST00000111670 5047 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Sp3-201ENSMUST00000066003 3808 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.24□□□□□ -0.93
SgcaP82350 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.24□□□□□ -0.93
SgcaP82350 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.24□□□□□ -0.93
SgcaP82350 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm5187-201ENSMUST00000117317 991 ntBASIC9.24□□□□□ -0.93
SgcaP82350 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC9.24□□□□□ -0.93
SgcaP82350 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
SgcaP82350 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SgcaP82350 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Gm10608-202ENSMUST00000213924 676 ntBASIC9.24□□□□□ -0.93
SgcaP82350 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.24□□□□□ -0.93
SgcaP82350 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
SgcaP82350 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.24□□□□□ -0.93
SgcaP82350 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
SgcaP82350 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.24□□□□□ -0.93
SgcaP82350 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
SgcaP82350 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.23□□□□□ -0.93
SgcaP82350 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Gm44914-201ENSMUST00000207191 2720 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Mir1896-201ENSMUST00000122641 81 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Gm9353-201ENSMUST00000200472 604 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Gm45598-202ENSMUST00000210719 986 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Gm45880-201ENSMUST00000213041 853 ntBASIC9.23□□□□□ -0.93
SgcaP82350 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.23□□□□□ -0.93
SgcaP82350 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.23□□□□□ -0.93
SgcaP82350 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
SgcaP82350 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
SgcaP82350 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
SgcaP82350 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms