Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.93□□□□□ -0.82
SgcbP82349 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SgcbP82349 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SgcbP82349 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
SgcbP82349 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SgcbP82349 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SgcbP82349 AC163296.2-201ENSMUST00000220177 1315 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC9.93□□□□□ -0.82
SgcbP82349 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.93□□□□□ -0.82
SgcbP82349 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC9.93□□□□□ -0.82
SgcbP82349 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.93□□□□□ -0.82
SgcbP82349 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.93□□□□□ -0.82
SgcbP82349 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC9.93□□□□□ -0.82
SgcbP82349 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm19246-201ENSMUST00000173599 255 ntBASIC9.93□□□□□ -0.82
SgcbP82349 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm6098-201ENSMUST00000180234 330 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC9.93□□□□□ -0.82
SgcbP82349 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC9.93□□□□□ -0.82
SgcbP82349 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.93□□□□□ -0.82
SgcbP82349 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm45594-201ENSMUST00000211717 241 ntBASIC9.93□□□□□ -0.82
SgcbP82349 AC132881.2-201ENSMUST00000225474 709 ntBASIC9.93□□□□□ -0.82
SgcbP82349 AC173482.3-201ENSMUST00000225492 1212 ntBASIC9.93□□□□□ -0.82
SgcbP82349 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.93□□□□□ -0.82
SgcbP82349 AC165154.1-201ENSMUST00000226661 340 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SgcbP82349 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm4780-202ENSMUST00000215200 2644 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SgcbP82349 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.93□□□□□ -0.82
SgcbP82349 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC9.93□□□□□ -0.82
SgcbP82349 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.93□□□□□ -0.82
SgcbP82349 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SgcbP82349 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SgcbP82349 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SgcbP82349 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.92□□□□□ -0.82
SgcbP82349 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SgcbP82349 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.92□□□□□ -0.82
SgcbP82349 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SgcbP82349 Snord17-201ENSMUST00000104526 238 ntBASIC9.92□□□□□ -0.82
SgcbP82349 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC9.92□□□□□ -0.82
SgcbP82349 Gm4879-201ENSMUST00000122190 1272 ntBASIC9.92□□□□□ -0.82
SgcbP82349 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcbP82349 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.92□□□□□ -0.82
SgcbP82349 Gm22442-201ENSMUST00000157256 144 ntBASIC9.92□□□□□ -0.82
SgcbP82349 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
SgcbP82349 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
SgcbP82349 Gm26134-201ENSMUST00000178484 110 ntBASIC9.92□□□□□ -0.82
SgcbP82349 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms