Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.34□□□□□ -0.59
Ybx1P62960 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.34□□□□□ -0.59
Ybx1P62960 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Ybx1P62960 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 Gm26782-203ENSMUST00000227103 751 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ybx1P62960 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.34□□□□□ -0.59
Ybx1P62960 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.34□□□□□ -0.59
Ybx1P62960 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ybx1P62960 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.34□□□□□ -0.59
Ybx1P62960 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ybx1P62960 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Gm16459-201ENSMUST00000121443 686 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Gm24312-201ENSMUST00000178677 119 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Gm9625-201ENSMUST00000180422 955 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Mir6387-201ENSMUST00000184042 108 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Gm7880-201ENSMUST00000203748 871 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 AC169511.1-201ENSMUST00000227639 995 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.33□□□□□ -0.6
Ybx1P62960 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ybx1P62960 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Ybx1P62960 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.32□□□□□ -0.6
Ybx1P62960 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.32□□□□□ -0.6
Ybx1P62960 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.32□□□□□ -0.6
Ybx1P62960 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.32□□□□□ -0.6
Ybx1P62960 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.32□□□□□ -0.6
Ybx1P62960 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ybx1P62960 Gm43752-201ENSMUST00000198475 697 ntBASIC11.32□□□□□ -0.6
Ybx1P62960 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms