Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lsm6P62313 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Lsm6P62313 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Lsm6P62313 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lsm6P62313 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Lsm6P62313 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Lsm6P62313 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Lsm6P62313 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.71□□□□□ -0.86
Lsm6P62313 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Lsm6P62313 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 B9d1os-201ENSMUST00000137010 674 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Lsm6P62313 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.71□□□□□ -0.86
Lsm6P62313 Gm27441-201ENSMUST00000185000 105 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 Platr10-202ENSMUST00000191479 818 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 Gm37458-201ENSMUST00000194055 410 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 Gm43068-201ENSMUST00000201095 1273 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 Gm9132-201ENSMUST00000210182 832 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.71□□□□□ -0.86
Lsm6P62313 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Lsm6P62313 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.71□□□□□ -0.86
Lsm6P62313 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.71□□□□□ -0.86
Lsm6P62313 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.71□□□□□ -0.86
Lsm6P62313 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lsm6P62313 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.7□□□□□ -0.86
Lsm6P62313 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.7□□□□□ -0.86
Lsm6P62313 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm20426-201ENSMUST00000173657 440 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.7□□□□□ -0.86
Lsm6P62313 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.7□□□□□ -0.86
Lsm6P62313 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.7□□□□□ -0.86
Lsm6P62313 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Lsm6P62313 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Lsm6P62313 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.7□□□□□ -0.86
Lsm6P62313 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Lsm6P62313 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Lsm6P62313 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.7□□□□□ -0.86
Lsm6P62313 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lsm6P62313 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm6P62313 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm6P62313 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm6P62313 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm6P62313 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm6P62313 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lsm6P62313 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lsm6P62313 Gm9133-201ENSMUST00000118289 540 ntBASIC9.69□□□□□ -0.86
Lsm6P62313 Gm12986-201ENSMUST00000119037 967 ntBASIC9.69□□□□□ -0.86
Lsm6P62313 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.69□□□□□ -0.86
Lsm6P62313 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.69□□□□□ -0.86
Lsm6P62313 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms