Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.44□□□□□ -0.74
Nup43P59235 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gm14667-201ENSMUST00000119448 1350 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nup43P59235 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Nup43P59235 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.44□□□□□ -0.74
Nup43P59235 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.44□□□□□ -0.74
Nup43P59235 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gm12899-201ENSMUST00000120565 551 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Gm13117-201ENSMUST00000120894 691 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Gm14665-201ENSMUST00000122294 557 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Mir1956-201ENSMUST00000157748 65 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nup43P59235 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nup43P59235 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nup43P59235 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nup43P59235 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gm39288-201ENSMUST00000210554 446 ntBASIC10.44□□□□□ -0.74
Nup43P59235 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Id2-203ENSMUST00000222667 958 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.44□□□□□ -0.74
Nup43P59235 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup43P59235 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.43□□□□□ -0.74
Nup43P59235 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Nup43P59235 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.43□□□□□ -0.74
Nup43P59235 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup43P59235 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Gm12439-201ENSMUST00000117162 365 ntBASIC10.43□□□□□ -0.74
Nup43P59235 Gm12663-201ENSMUST00000118481 958 ntBASIC10.43□□□□□ -0.74
Nup43P59235 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.43□□□□□ -0.74
Nup43P59235 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Gm9369-201ENSMUST00000196009 733 ntBASIC10.43□□□□□ -0.74
Nup43P59235 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.43□□□□□ -0.74
Nup43P59235 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC10.43□□□□□ -0.74
Nup43P59235 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.43□□□□□ -0.74
Nup43P59235 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.43□□□□□ -0.74
Nup43P59235 Gm19009-201ENSMUST00000223072 823 ntBASIC10.43□□□□□ -0.74
Nup43P59235 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.43□□□□□ -0.74
Nup43P59235 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nup43P59235 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup43P59235 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nup43P59235 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.43□□□□□ -0.74
Nup43P59235 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nup43P59235 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nup43P59235 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nup43P59235 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.42□□□□□ -0.74
Nup43P59235 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nup43P59235 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 350.9 ms