Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rrp1P56183 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Gm16219-201ENSMUST00000120096 274 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Gm7985-201ENSMUST00000183329 981 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Mir7051-201ENSMUST00000184167 73 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Gm7255-201ENSMUST00000187371 908 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 AU022133-201ENSMUST00000200601 873 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Gm43916-201ENSMUST00000205062 967 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Gm31941-201ENSMUST00000209689 350 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.42□□□□□ -0.42
Rrp1P56183 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.42□□□□□ -0.42
Rrp1P56183 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rrp1P56183 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.42□□□□□ -0.42
Rrp1P56183 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rrp1P56183 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rrp1P56183 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rrp1P56183 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.41□□□□□ -0.42
Rrp1P56183 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.41□□□□□ -0.42
Rrp1P56183 Gm11450-201ENSMUST00000121144 333 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.41□□□□□ -0.42
Rrp1P56183 Mir3102-201ENSMUST00000175555 104 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Gm27552-201ENSMUST00000183351 62 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Gm27844-201ENSMUST00000183613 62 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.41□□□□□ -0.42
Rrp1P56183 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Rrp1P56183 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rrp1P56183 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.41□□□□□ -0.42
Rrp1P56183 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rrp1P56183 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rrp1P56183 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Rrp1P56183 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rrp1P56183 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.41□□□□□ -0.42
Rrp1P56183 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rrp1P56183 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rrp1P56183 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.4□□□□□ -0.42
Rrp1P56183 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.4□□□□□ -0.42
Rrp1P56183 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rrp1P56183 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp1P56183 Gm12419-201ENSMUST00000116649 636 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms