Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SftpbP50405 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.26□□□□□ -0.61
SftpbP50405 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.26□□□□□ -0.61
SftpbP50405 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC11.26□□□□□ -0.61
SftpbP50405 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SftpbP50405 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gm24990-201ENSMUST00000157406 323 ntBASIC11.26□□□□□ -0.61
SftpbP50405 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
SftpbP50405 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.26□□□□□ -0.61
SftpbP50405 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
SftpbP50405 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.26□□□□□ -0.61
SftpbP50405 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SftpbP50405 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SftpbP50405 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Gm23251-201ENSMUST00000103773 110 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Gm11941-201ENSMUST00000119904 610 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.25□□□□□ -0.61
SftpbP50405 Gm24074-201ENSMUST00000158178 260 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Gm21778-201ENSMUST00000178779 471 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.25□□□□□ -0.61
SftpbP50405 Gm29067-201ENSMUST00000190821 470 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Gm37284-201ENSMUST00000193607 539 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.25□□□□□ -0.61
SftpbP50405 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.25□□□□□ -0.61
SftpbP50405 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
SftpbP50405 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.25□□□□□ -0.61
SftpbP50405 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
SftpbP50405 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
SftpbP50405 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SftpbP50405 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.24□□□□□ -0.61
SftpbP50405 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.24□□□□□ -0.61
SftpbP50405 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SftpbP50405 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SftpbP50405 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SftpbP50405 Gm22711-201ENSMUST00000116890 133 ntBASIC11.24□□□□□ -0.61
SftpbP50405 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms