Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.94□□□□□ -0.66
Sox18P43680 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Sox18P43680 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm42942-201ENSMUST00000196086 1328 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm13171-201ENSMUST00000117233 391 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.94□□□□□ -0.66
Sox18P43680 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm24078-201ENSMUST00000158184 103 ntBASIC10.94□□□□□ -0.66
Sox18P43680 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm5267-201ENSMUST00000191574 1045 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox18P43680 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm18035-201ENSMUST00000211962 589 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm9204-201ENSMUST00000212641 947 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm7688-201ENSMUST00000212857 337 ntBASIC10.94□□□□□ -0.66
Sox18P43680 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 AC120394.1-201ENSMUST00000217153 351 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Sox18P43680 AC152169.1-201ENSMUST00000223901 701 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Sox18P43680 Gm6564-201ENSMUST00000075377 619 ntBASIC10.94□□□□□ -0.66
Sox18P43680 Gm5449-201ENSMUST00000081132 357 ntBASIC10.94□□□□□ -0.66
Sox18P43680 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox18P43680 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Sox18P43680 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.94□□□□□ -0.66
Sox18P43680 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sox18P43680 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Gm6158-201ENSMUST00000109467 904 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Gm12247-201ENSMUST00000117585 670 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm14497-201ENSMUST00000119537 580 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm15279-201ENSMUST00000155593 288 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm3715-201ENSMUST00000172308 617 ntBASIC10.93□□□□□ -0.66
Sox18P43680 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox18P43680 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC10.93□□□□□ -0.66
Sox18P43680 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox18P43680 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox18P43680 Gm18985-201ENSMUST00000196472 1079 ntBASIC10.93□□□□□ -0.66
Sox18P43680 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms