Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nkx1-2P42580 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.54□□□□□ -0.24
Nkx1-2P42580 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Nkx1-2P42580 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm14592-201ENSMUST00000117201 560 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm16219-201ENSMUST00000120096 274 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Mir8115-201ENSMUST00000184992 119 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm27441-201ENSMUST00000185000 105 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm37284-201ENSMUST00000193607 539 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.53□□□□□ -0.24
Nkx1-2P42580 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nkx1-2P42580 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Gm44798-201ENSMUST00000208123 2410 ntBASIC13.52□□□□□ -0.24
Nkx1-2P42580 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nkx1-2P42580 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gm24074-201ENSMUST00000158178 260 ntBASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gm23699-201ENSMUST00000158835 135 ntBASIC13.52□□□□□ -0.25
Nkx1-2P42580 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.52□□□□□ -0.25
Nkx1-2P42580 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.52□□□□□ -0.25
Nkx1-2P42580 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gm23105-201ENSMUST00000083719 134 ntBASIC13.52□□□□□ -0.25
Nkx1-2P42580 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nkx1-2P42580 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nkx1-2P42580 Gm23272-201ENSMUST00000104053 129 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms