Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Gm19972-201ENSMUST00000218180 5664 ntBASIC10.09□□□□□ -0.79
Nedd8P29595 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nedd8P29595 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.09□□□□□ -0.79
Nedd8P29595 Tacr1-202ENSMUST00000203775 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Gm16387-201ENSMUST00000180990 2632 ntBASIC10.09□□□□□ -0.79
Nedd8P29595 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Nedd8P29595 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Nedd8P29595 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.08□□□□□ -0.8
Nedd8P29595 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Nedd8P29595 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Nedd8P29595 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Snord17-201ENSMUST00000104526 238 ntBASIC10.08□□□□□ -0.8
Nedd8P29595 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.08□□□□□ -0.8
Nedd8P29595 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Gm26047-201ENSMUST00000157308 113 ntBASIC10.08□□□□□ -0.8
Nedd8P29595 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.08□□□□□ -0.8
Nedd8P29595 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Gm26047-202ENSMUST00000198840 115 ntBASIC10.08□□□□□ -0.8
Nedd8P29595 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nedd8P29595 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.08□□□□□ -0.8
Nedd8P29595 Gm5950-201ENSMUST00000213337 772 ntBASIC10.08□□□□□ -0.8
Nedd8P29595 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Nedd8P29595 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Gm45837-201ENSMUST00000084894 4139 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nedd8P29595 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Nedd8P29595 Pklr-202ENSMUST00000107482 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Fgfr1-213ENSMUST00000167764 2915 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.08□□□□□ -0.8
Nedd8P29595 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nedd8P29595 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Nedd8P29595 Atg9a-201ENSMUST00000040689 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Nedd8P29595 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Ces1f-201ENSMUST00000034178 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm26286-201ENSMUST00000104166 134 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Gm25214-201ENSMUST00000104573 129 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm11531-201ENSMUST00000117614 555 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.07□□□□□ -0.8
Nedd8P29595 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.07□□□□□ -0.8
Nedd8P29595 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm22846-201ENSMUST00000157706 270 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.07□□□□□ -0.8
Nedd8P29595 Olfml3-204ENSMUST00000169286 874 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.07□□□□□ -0.8
Nedd8P29595 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm4310-201ENSMUST00000177847 889 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Gm27437-201ENSMUST00000183429 107 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Nedd8P29595 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.07□□□□□ -0.8
Nedd8P29595 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC10.07□□□□□ -0.8
Nedd8P29595 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms