Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.82□□□□□ -0.84
P20040 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.82□□□□□ -0.84
P20040 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P20040 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
P20040 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
P20040 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.82□□□□□ -0.84
P20040 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.82□□□□□ -0.84
P20040 Gm22334-201ENSMUST00000158070 133 ntBASIC9.82□□□□□ -0.84
P20040 Gm3329-201ENSMUST00000159873 556 ntBASIC9.82□□□□□ -0.84
P20040 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.82□□□□□ -0.84
P20040 Gm23045-201ENSMUST00000175041 96 ntBASIC9.82□□□□□ -0.84
P20040 Gm5523-201ENSMUST00000180415 997 ntBASIC9.82□□□□□ -0.84
P20040 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.82□□□□□ -0.84
P20040 Gm9132-201ENSMUST00000210182 832 ntBASIC9.82□□□□□ -0.84
P20040 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.82□□□□□ -0.84
P20040 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.82□□□□□ -0.84
P20040 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.82□□□□□ -0.84
P20040 Gm6781-201ENSMUST00000038304 1242 ntBASIC9.82□□□□□ -0.84
P20040 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
P20040 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
P20040 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.82□□□□□ -0.84
P20040 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
P20040 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.82□□□□□ -0.84
P20040 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P20040 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
P20040 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.82□□□□□ -0.84
P20040 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P20040 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
P20040 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.81□□□□□ -0.84
P20040 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
P20040 Gm7150-201ENSMUST00000122032 981 ntBASIC9.81□□□□□ -0.84
P20040 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
P20040 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC9.81□□□□□ -0.84
P20040 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.81□□□□□ -0.84
P20040 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.81□□□□□ -0.84
P20040 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.81□□□□□ -0.84
P20040 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.81□□□□□ -0.84
P20040 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC9.81□□□□□ -0.84
P20040 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.81□□□□□ -0.84
P20040 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.81□□□□□ -0.84
P20040 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.81□□□□□ -0.84
P20040 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.81□□□□□ -0.84
P20040 Gm4978-201ENSMUST00000071565 801 ntBASIC9.81□□□□□ -0.84
P20040 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
P20040 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
P20040 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
P20040 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms