Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.26□□□□□ -0.61
PdgfrbP05622 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
PdgfrbP05622 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
PdgfrbP05622 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
PdgfrbP05622 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm14942-201ENSMUST00000119642 336 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.25□□□□□ -0.61
PdgfrbP05622 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm29107-201ENSMUST00000190910 347 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 Nsd1-205ENSMUST00000224693 852 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 AC136019.1-201ENSMUST00000226503 1412 ntBASIC11.25□□□□□ -0.61
PdgfrbP05622 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
PdgfrbP05622 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
PdgfrbP05622 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm4732-201ENSMUST00000118778 473 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm11246-201ENSMUST00000120880 345 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm14603-201ENSMUST00000121275 448 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm22764-201ENSMUST00000158370 92 ntBASIC11.24□□□□□ -0.61
PdgfrbP05622 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
PdgfrbP05622 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms