Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gm8420-201ENSMUST00000097103 598 ntBASIC9.3□□□□□ -0.92
Hoxa3P02831 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Hoxa3P02831 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Hoxa3P02831 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm11422-201ENSMUST00000118925 1103 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxa3P02831 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm23218-201ENSMUST00000158124 276 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm44323-201ENSMUST00000198689 129 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.29□□□□□ -0.92
Hoxa3P02831 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.29□□□□□ -0.92
Hoxa3P02831 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Hoxa3P02831 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Hoxa3P02831 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Hoxa3P02831 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Gm14270-201ENSMUST00000118388 846 ntBASIC9.28□□□□□ -0.92
Hoxa3P02831 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.28□□□□□ -0.92
Hoxa3P02831 Gm18776-201ENSMUST00000188833 654 ntBASIC9.28□□□□□ -0.92
Hoxa3P02831 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.28□□□□□ -0.92
Hoxa3P02831 Gm18059-201ENSMUST00000208073 580 ntBASIC9.28□□□□□ -0.92
Hoxa3P02831 Gm18514-201ENSMUST00000218980 436 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms