Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm7255-201ENSMUST00000187371 908 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm3961-201ENSMUST00000204425 994 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm21811-201ENSMUST00000096485 930 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.84□□□□□ -0.67
Slc1a6O35544 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Slc1a6O35544 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Slc1a6O35544 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc1a6O35544 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm24891-201ENSMUST00000104391 136 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm12501-201ENSMUST00000119163 529 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm8302-201ENSMUST00000119217 852 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm11244-201ENSMUST00000121243 237 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm25668-201ENSMUST00000157700 129 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm37284-201ENSMUST00000193607 539 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm43916-201ENSMUST00000205062 967 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm44506-201ENSMUST00000206278 965 ntBASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Slc1a6O35544 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Slc1a6O35544 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms