Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clrn2B2RVW2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.77□□□□□ -0.36
Clrn2B2RVW2 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Gm22495-201ENSMUST00000104492 126 ntBASIC12.77□□□□□ -0.37
Clrn2B2RVW2 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Gm6291-201ENSMUST00000179994 309 ntBASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Platr10-202ENSMUST00000191479 818 ntBASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Clrn2B2RVW2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm6441-201ENSMUST00000120983 696 ntBASIC12.76□□□□□ -0.37
Clrn2B2RVW2 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm45893-201ENSMUST00000211899 247 ntBASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clrn2B2RVW2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Gm16209-201ENSMUST00000118457 627 ntBASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Gm5764-201ENSMUST00000118817 885 ntBASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Gm10171-201ENSMUST00000126220 628 ntBASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.75□□□□□ -0.37
Clrn2B2RVW2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms