Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm24933-201ENSMUST00000103762 110 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm23252-201ENSMUST00000103776 110 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm22994-201ENSMUST00000175422 82 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm26443-201ENSMUST00000179610 110 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Mir7088-201ENSMUST00000184227 86 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm8022-201ENSMUST00000191763 904 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm37301-201ENSMUST00000195412 568 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm18122-201ENSMUST00000211390 904 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Scn11aQ9R053 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.93□□□□□ -0.34
Scn11aQ9R053 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm26208-201ENSMUST00000158677 124 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm18466-201ENSMUST00000209147 499 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm13608-201ENSMUST00000121807 1406 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Mir598-201ENSMUST00000102094 79 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm6291-201ENSMUST00000179994 309 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm8525-201ENSMUST00000189674 861 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn11aQ9R053 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.92□□□□□ -0.34
Scn11aQ9R053 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm45170-201ENSMUST00000206746 1671 ntBASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.91□□□□□ -0.34
Scn11aQ9R053 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm15554-201ENSMUST00000120406 913 ntBASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC12.91□□□□□ -0.34
Scn11aQ9R053 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms