Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.58□□□□□ -0.72
Ube4bQ9ES00 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ube4bQ9ES00 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 AC115891.3-201ENSMUST00000219161 2472 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm2991-201ENSMUST00000173338 480 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm18893-201ENSMUST00000198416 943 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ube4bQ9ES00 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Adcy3-201ENSMUST00000020984 4348 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm23270-201ENSMUST00000104055 131 ntBASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.56□□□□□ -0.72
Ube4bQ9ES00 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm38266-201ENSMUST00000194931 421 ntBASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm38321-201ENSMUST00000195053 235 ntBASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ube4bQ9ES00 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ube4bQ9ES00 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 289.2 ms