Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chmp4cQ9D7F7 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm12419-201ENSMUST00000116649 636 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm15236-201ENSMUST00000117309 379 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm15573-201ENSMUST00000119487 540 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm11244-201ENSMUST00000121243 237 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm10051-201ENSMUST00000145209 414 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm23694-201ENSMUST00000179335 110 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm19353-201ENSMUST00000184561 445 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm44506-201ENSMUST00000206278 965 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm5363-201ENSMUST00000211927 938 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chmp4cQ9D7F7 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm10699-201ENSMUST00000098916 2130 ntBASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm19327-201ENSMUST00000220651 3271 ntBASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm22144-201ENSMUST00000157402 102 ntBASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp4cQ9D7F7 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms